Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011611.1 Corchorus olitorius cultivar O-4 contig11644, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2647

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60--406
154
2.2
154
88
1
516
40
18
17
24
1.91
213--594
192
2.0
193
89
0
586
39
19
18
23
1.92
1--753
347
2.2
348
92
2
1266
40
18
17
23
1.91
411--804
155
2.6
152
90
3
590
41
18
18
21
1.91
691--911
108
2.1
107
91
0
352
42
16
18
22
1.89
536--1065
262
2.0
262
92
0
891
42
18
18
21
1.90
799--2647
154
12.0
153
88
2
2636
40
19
18
22
1.91
411--1214
416
1.9
415
89
2
1258
41
18
18
21
1.90

Tables:   1

The End!