Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011633.1 Corchorus olitorius cultivar O-4 contig11666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1521

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--776
154
5.0
154
90
2
1225
41
18
17
22
1.90
1--776
310
2.5
308
91
2
1243
41
18
17
22
1.90
671--885
108
2.0
108
88
3
326
41
17
19
21
1.90
517--1031
262
2.0
262
89
3
804
41
17
19
21
1.90
777--1344
154
3.7
153
86
4
786
41
19
17
22
1.91
1246--1451
107
1.9
107
94
0
367
40
16
20
22
1.91

Tables:   1

The End!