Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011647.1 Corchorus olitorius cultivar O-4 contig11680, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2597

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2594
154
16.5
154
82
7
2938
21
18
18
41
1.90
1--2594
615
4.1
612
82
8
3120
21
18
18
41
1.90
1369--1472
51
2.0
51
98
0
199
24
13
19
43
1.86
1390--1471
27
3.1
27
61
22
66
21
13
17
47
1.81
1219--1626
205
2.0
200
88
3
602
24
17
16
41
1.90

Tables:   1

The End!