Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011657.1 Corchorus olitorius cultivar O-4 contig11690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1892

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1311--1892
20
31.9
20
76
19
524
20
32
31
14
1.93
1290--1892
53
11.1
53
72
17
347
20
32
31
15
1.93
1339--1433
35
2.8
34
92
6
158
22
32
30
14
1.94
1447--1880
33
12.1
33
72
20
188
20
32
31
14
1.93
1478--1506
13
2.1
14
93
6
51
24
31
34
10
1.89
1372--1892
73
7.1
74
77
14
421
20
32
31
15
1.94

Tables:   1

The End!