Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011661.1 Corchorus olitorius cultivar O-4 contig11694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1893

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--191
101
1.9
101
86
4
278
43
19
17
19
1.88
96--662
154
3.7
154
92
0
902
41
17
19
22
1.90
558--763
101
2.0
101
89
3
317
43
19
16
20
1.88
250--1069
409
2.0
407
87
4
1181
41
18
19
20
1.90
404--915
255
2.0
254
90
2
796
42
18
18
20
1.90
659--1893
153
8.0
151
89
3
1688
42
18
19
19
1.90
1--1842
563
3.2
560
85
8
2045
42
18
19
20
1.90
659--1893
308
4.0
307
89
3
1926
42
18
19
19
1.90

Tables:   1

The End!