Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011689.1 Corchorus olitorius cultivar O-4 contig11722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4881

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1271
463
2.7
461
91
1
2040
21
18
18
41
1.91
1--1272
617
2.1
620
94
1
2223
21
18
19
41
1.91
1--1272
154
8.2
154
91
0
1963
21
18
19
41
1.91
1166--1378
107
2.0
107
89
3
331
20
21
18
39
1.92
1012--1529
261
2.0
261
93
1
887
20
19
18
40
1.92
1273--1758
154
3.2
154
92
0
801
21
19
19
39
1.92
858--1687
415
2.0
415
94
0
1457
21
19
18
40
1.92

Tables:   1

The End!