Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001172.1 Corchorus olitorius cultivar O-4 contig01172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2071

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
637--677
21
2.0
21
85
9
57
53
0
2
43
1.13
1851--1921
32
2.2
32
94
0
124
42
5
14
38
1.69
1883--1949
23
3.0
23
84
2
64
37
7
16
38
1.77
1867--1929
32
2.0
32
93
0
108
39
7
14
38
1.75
1939--2047
37
2.9
37
84
4
139
37
16
16
29
1.91

Tables:   1

The End!