Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011726.1 Corchorus olitorius cultivar O-4 contig11759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5295

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1342
154
8.8
154
86
3
1868
41
18
18
21
1.90
1--5295
308
17.4
308
73
11
3789
40
18
17
23
1.91
1635--2094
155
3.0
153
87
6
653
41
18
18
21
1.90
2404--3324
154
6.0
153
88
4
1329
41
18
18
21
1.90
3617--5295
154
11.0
154
88
3
2297
41
19
18
21
1.91
3617--5295
765
2.2
764
87
3
2418
41
19
18
21
1.91

Tables:   1

The End!