Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011755.1 Corchorus olitorius cultivar O-4 contig11788, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3200

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--711
153
4.6
154
88
3
1049
21
19
18
40
1.91
1--710
307
2.3
305
87
3
1016
21
19
18
40
1.91
605--924
107
3.0
107
94
0
552
22
19
16
40
1.91
819--2304
154
9.7
154
87
3
2041
23
18
18
40
1.91
825--2304
614
2.4
611
92
1
2394
23
18
18
40
1.91
2198--2412
108
2.0
107
91
0
349
22
20
18
38
1.93
2060--2567
262
1.9
261
89
2
777
22
19
18
39
1.92
2305--3141
154
5.4
154
89
1
1180
21
18
19
39
1.92

Tables:   1

The End!