Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011769.1 Corchorus olitorius cultivar O-4 contig11802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3441

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--3064
154
19.9
154
89
1
4371
40
18
18
22
1.91
8--3064
461
6.6
462
88
2
4429
40
18
18
22
1.91
3006--3121
57
2.0
58
89
1
180
35
23
23
18
1.96
2859--3272
211
2.0
212
88
1
625
39
21
19
19
1.92
3067--3441
155
2.4
152
87
5
529
40
20
18
21
1.92
2698--3431
366
2.0
367
87
3
1068
40
20
19
20
1.92

Tables:   1

The End!