Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011772.1 Corchorus olitorius cultivar O-4 contig11805, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2434

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--731
154
4.7
154
92
1
1208
20
19
19
40
1.92
4--731
307
2.4
309
93
0
1210
20
19
19
40
1.92
696--777
39
2.1
39
95
0
146
26
15
20
36
1.93
541--926
193
2.0
194
90
1
616
23
17
19
39
1.92
387--1082
347
2.0
348
91
1
1121
21
18
19
40
1.92
735--2434
154
11.0
154
90
1
2507
21
19
19
40
1.91
735--2434
461
3.7
459
89
1
2553
21
19
19
40
1.91

Tables:   1

The End!