Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011819.1 Corchorus olitorius cultivar O-4 contig11852, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27422

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6289--6335
21
2.2
21
80
0
58
31
8
25
34
1.86
6385--6470
21
4.1
21
81
0
91
29
9
33
27
1.88
6385--6470
42
2.0
42
86
0
118
29
9
33
27
1.88
6416--6477
21
3.0
21
87
0
70
33
9
29
27
1.88
7891--7953
32
1.9
33
90
3
101
25
17
30
26
1.97
15550--15600
23
2.0
25
82
14
61
41
1
5
50
1.37
21553--21598
17
2.7
17
86
6
58
23
21
21
32
1.98
22917--23027
56
2.0
56
92
7
190
34
25
1
38
1.67
23092--23172
42
1.9
42
87
0
117
30
6
16
46
1.71
24476--24523
14
3.6
14
72
11
55
29
27
10
33
1.90

Tables:   1

The End!