Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011823.1 Corchorus olitorius cultivar O-4 contig11856, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12066

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1110--1203
31
3.1
30
83
11
120
53
6
14
25
1.65
3212--3264
11
5.2
10
78
17
56
39
1
18
39
1.62
3211--3264
19
2.6
21
77
19
60
38
1
18
40
1.61
9093--9188
50
1.9
50
91
0
156
31
17
15
35
1.92
9633--9799
79
2.1
79
94
0
289
28
18
14
38
1.91
9886--10315
69
6.2
69
92
1
666
26
28
15
29
1.96
11274--11342
35
2.0
35
88
0
102
44
10
10
34
1.72

Tables:   1

The End!