Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011826.1 Corchorus olitorius cultivar O-4 contig11859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9621

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--85
31
2.7
31
85
0
89
16
22
27
34
1.95
2580--2698
3
38.7
3
93
5
202
34
0
0
64
0.99
3423--3460
3
12.7
3
94
0
67
31
2
0
65
1.06
4282--4321
21
1.9
21
89
0
62
45
7
22
25
1.78
4288--4473
22
8.2
22
74
16
123
38
8
14
38
1.77
4306--4363
28
2.1
28
100
0
116
36
6
13
43
1.71
4334--4473
44
3.2
44
81
10
146
38
8
12
40
1.74

Tables:   1

The End!