Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011831.1 Corchorus olitorius cultivar O-4 contig11864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26680

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
134--175
18
2.3
18
88
8
59
52
4
0
42
1.22
158--208
24
2.1
24
85
7
68
50
0
7
41
1.31
7268--7309
21
2.0
21
86
9
59
73
9
9
7
1.24
12423--12456
11
2.9
12
86
4
52
64
2
14
17
1.40
12622--12698
34
2.3
33
82
6
93
18
12
2
66
1.36
14130--14160
15
2.1
15
93
0
53
29
0
6
64
1.18
16163--16197
6
5.8
6
100
0
70
34
0
14
51
1.42
22421--22590
31
5.5
31
82
0
205
18
25
25
31
1.98
24815--24873
22
2.5
24
78
15
61
23
22
5
49
1.70

Tables:   1

The End!