Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011834.1 Corchorus olitorius cultivar O-4 contig11867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3645

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--255
76
2.0
73
85
8
197
39
10
18
31
1.84
652--681
15
2.1
14
93
6
51
70
0
13
16
1.18
644--687
21
2.2
19
84
8
52
70
0
15
13
1.17
1072--1118
5
9.0
5
82
17
60
59
19
2
19
1.48
1055--1117
31
2.0
31
81
6
74
65
17
1
15
1.36
1085--1119
11
3.2
11
88
12
54
65
17
0
17
1.27
1072--1118
16
3.0
16
93
3
78
59
19
2
19
1.48
1698--1848
50
3.0
50
86
0
194
33
16
15
35
1.90
2434--2664
50
4.6
50
93
1
374
30
29
11
28
1.92
2717--2797
27
3.1
27
61
25
66
32
14
27
25
1.95
2673--2855
50
3.7
50
93
2
289
35
13
25
25
1.93
2842--2956
57
2.0
57
100
0
230
46
12
22
19
1.83
3167--3255
27
3.3
27
87
0
124
16
19
26
37
1.93

Tables:   1

The End!