Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011836.1 Corchorus olitorius cultivar O-4 contig11869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22810

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
617--765
50
2.9
51
83
7
187
34
17
16
32
1.92
1190--1368
92
2.0
91
91
2
288
30
21
11
36
1.89
1190--1377
91
2.1
91
88
4
281
29
20
12
37
1.89
1450--1586
50
2.7
50
94
1
247
29
24
13
32
1.94
1543--1980
69
6.3
69
90
1
655
27
27
15
29
1.96
2071--2316
103
2.4
102
91
1
384
27
19
13
39
1.89
10174--10295
33
3.7
33
73
0
118
27
49
1
22
1.59
10182--10318
66
2.1
66
91
0
220
24
52
0
21
1.52
12565--12617
2
26.5
2
88
0
79
43
5
0
50
1.25
14379--14413
16
2.2
16
100
0
70
45
17
25
11
1.81
14509--14832
41
7.9
41
89
4
429
36
19
14
29
1.91

Tables:   1

The End!