Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011843.1 Corchorus olitorius cultivar O-4 contig11876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19467

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3400--3428
2
14.5
2
100
0
58
48
0
0
51
1.00
8039--8111
29
2.4
31
82
8
80
43
6
28
20
1.77
13308--13352
3
15.0
3
100
0
90
66
0
0
33
0.92
17288--17326
18
2.2
18
100
0
78
20
5
28
46
1.72
19317--19374
22
2.6
23
86
8
84
36
15
10
37
1.82
19334--19434
42
2.4
44
78
9
120
37
12
9
39
1.77

Tables:   1

The End!