Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011846.1 Corchorus olitorius cultivar O-4 contig11879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21365

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3301--3342
22
1.9
22
90
0
66
47
21
4
26
1.70
8848--8908
29
2.1
30
84
3
79
49
6
1
42
1.38
9005--9061
25
2.3
25
79
8
64
43
0
0
56
0.99
9105--9200
41
2.3
41
98
1
183
21
23
32
21
1.98
9514--9946
178
2.4
178
84
6
547
36
18
12
32
1.87
12332--12418
40
2.2
40
83
4
104
24
22
8
44
1.79

Tables:   1

The End!