Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011857.1 Corchorus olitorius cultivar O-4 contig11890, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17430

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3595--3845
130
1.9
130
88
6
375
51
1
10
36
1.48
3595--3871
129
2.1
131
84
6
332
51
2
10
36
1.48
3932--3975
15
2.9
15
96
0
79
47
0
20
31
1.50
3931--3979
21
2.3
23
80
20
70
48
0
20
30
1.50
9333--9376
6
7.3
6
92
0
70
31
18
47
2
1.61
10368--10402
17
2.1
17
88
0
52
14
25
2
57
1.51
10548--10607
31
1.9
31
93
0
102
38
13
21
26
1.90
12974--13047
23
3.2
23
88
1
103
35
14
22
27
1.94

Tables:   1

The End!