Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011865.1 Corchorus olitorius cultivar O-4 contig11898, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6875

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1107--1140
13
2.7
13
90
4
52
85
0
14
0
0.60
1108--1141
17
2.0
17
88
0
50
82
0
17
0
0.67
1271--1307
10
3.9
10
82
13
51
43
2
8
45
1.47
1846--1880
11
3.3
10
88
11
52
77
11
2
8
1.10
4565--4606
15
2.7
15
92
3
66
64
14
9
11
1.50
5356--5381
11
2.4
11
100
0
52
69
7
15
7
1.35
5843--5870
14
2.0
14
100
0
56
35
7
14
42
1.73

Tables:   1

The End!