Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011867.1 Corchorus olitorius cultivar O-4 contig11900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19126

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3757--3792
19
1.9
18
88
5
54
41
8
22
27
1.82
9650--9675
11
2.4
11
100
0
52
7
15
7
69
1.35
14588--14618
14
2.2
14
94
0
53
19
9
16
54
1.68
15926--16011
43
2.0
43
97
0
163
26
26
6
39
1.82
16272--16475
34
5.9
34
75
10
189
29
16
19
34
1.93
16272--16404
70
1.9
70
85
1
185
31
15
18
35
1.91
19057--19109
22
2.4
22
81
6
63
18
7
9
64
1.47

Tables:   1

The End!