Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011875.1 Corchorus olitorius cultivar O-4 contig11908, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19213

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--68
3
22.3
3
100
0
134
67
0
0
32
0.91
771--833
27
2.3
26
84
15
74
46
0
7
46
1.32
921--979
31
1.9
31
89
0
91
47
5
23
23
1.71
1215--1252
2
19.0
2
89
10
60
47
2
0
50
1.15
1749--1834
33
2.7
30
76
7
82
30
12
12
44
1.80
11559--11752
98
2.0
96
84
9
254
27
12
19
40
1.87
14025--14084
8
7.4
8
74
10
50
60
0
3
36
1.14

Tables:   1

The End!