Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011878.1 Corchorus olitorius cultivar O-4 contig11911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17819

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5842--5866
13
1.9
13
100
0
50
40
8
4
48
1.51
11802--11880
36
2.2
36
81
0
95
15
6
53
25
1.65
11862--11924
18
3.3
18
75
6
63
19
1
55
23
1.51
11872--11966
42
2.3
41
85
5
122
17
5
55
21
1.61
11893--11981
42
2.2
39
88
6
133
15
8
58
16
1.62
11872--11972
21
4.9
20
71
16
75
17
5
55
20
1.63
12508--12543
12
2.9
12
87
4
54
41
33
0
25
1.55
13087--13486
173
2.3
172
84
4
491
36
20
14
29
1.91
17392--17472
42
1.9
42
92
0
135
48
13
7
30
1.70
17530--17648
57
2.0
59
90
4
188
42
1
21
34
1.63

Tables:   1

The End!