Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011879.1 Corchorus olitorius cultivar O-4 contig11912, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24724

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1718--1742
12
2.1
12
100
0
50
0
16
0
84
0.63
9222--9256
3
11.7
3
100
0
70
68
0
31
0
0.90
9281--9391
41
2.7
42
88
4
163
14
38
36
9
1.79
15708--15782
29
2.5
31
79
14
79
25
9
14
50
1.72
19397--19421
13
1.9
13
100
0
50
40
8
12
40
1.72
19671--19743
37
2.0
37
94
0
128
49
10
10
28
1.72
20234--20378
70
2.1
70
97
0
272
44
23
6
25
1.78
20761--20902
22
6.7
22
74
13
104
40
14
10
35
1.80
20781--20839
18
3.1
18
75
17
64
42
13
8
35
1.75
20760--20882
40
3.0
41
80
12
137
39
13
12
34
1.82
20962--21260
22
13.3
22
68
15
134
33
17
10
38
1.84
22951--23024
28
2.7
27
72
12
69
40
12
21
25
1.88

Tables:   1

The End!