Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011886.1 Corchorus olitorius cultivar O-4 contig11919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8610

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
934--1047
37
3.1
37
78
6
122
28
22
20
28
1.98
3119--3528
213
1.9
213
97
1
786
23
15
20
40
1.91
5888--6067
49
3.8
49
72
18
171
23
21
5
49
1.70
5888--6058
93
1.8
92
91
1
279
22
21
5
50
1.70
6091--6163
36
2.0
36
83
0
92
28
20
6
43
1.77
6127--6626
47
10.6
47
87
6
598
29
18
5
47
1.71
6413--6498
42
2.0
42
95
0
154
25
20
6
46
1.76
6416--6510
42
2.3
42
90
3
147
27
20
6
46
1.74
7057--7138
25
3.3
25
78
11
80
52
14
18
14
1.75
7075--7140
26
2.7
25
76
6
64
53
12
16
18
1.73

Tables:   1

The End!