Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011887.1 Corchorus olitorius cultivar O-4 contig11920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9726

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
892--967
27
2.7
28
85
4
91
22
14
25
38
1.92
3473--3507
11
3.2
11
91
0
61
0
2
17
80
0.84
8308--8374
33
2.0
33
97
0
125
40
19
11
28
1.87
8343--8456
49
2.3
49
84
4
149
32
18
14
34
1.92
9187--9481
105
2.8
105
91
0
455
27
27
16
28
1.97
9499--9719
35
6.3
35
88
3
320
29
20
22
27
1.98

Tables:   1

The End!