Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011889.1 Corchorus olitorius cultivar O-4 contig11922, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23007

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2152--2218
16
4.2
16
86
1
100
8
13
34
43
1.75
3424--3487
16
4.0
16
74
11
60
25
10
14
50
1.75
5108--5133
2
13.0
2
100
0
52
50
0
0
50
1.00
6818--6852
11
3.3
10
92
8
52
85
0
14
0
0.59
6815--6848
14
2.3
15
90
5
52
88
0
11
0
0.52
6815--6848
15
2.3
15
89
0
50
88
0
11
0
0.52
12344--12383
21
1.9
21
85
10
55
10
10
2
77
1.08
12901--13536
314
2.0
315
92
2
1055
30
17
22
28
1.97
18409--18451
22
1.9
23
95
4
79
37
13
23
25
1.92

Tables:   1

The End!