Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011891.1 Corchorus olitorius cultivar O-4 contig11924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11632

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2799--2842
21
2.0
22
82
4
54
18
6
6
68
1.35
6907--6952
23
2.0
23
82
0
56
45
2
21
30
1.64
8619--8660
15
2.7
15
92
3
66
64
14
9
11
1.50
11449--11496
16
3.1
16
77
14
55
0
10
16
72
1.10
11453--11501
22
2.1
25
88
11
77
0
8
16
75
1.03

Tables:   1

The End!