Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011911.1 Corchorus olitorius cultivar O-4 contig11944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21538

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3570--3633
21
3.0
21
93
0
101
28
15
25
31
1.96
3692--3776
21
4.0
21
84
0
116
30
12
22
34
1.92
3692--3774
42
2.0
42
92
0
139
31
13
20
34
1.91
3834--3938
21
5.0
21
87
2
149
27
15
22
34
1.94
3570--3917
142
2.4
142
88
1
536
30
13
23
32
1.93
3834--3934
41
2.4
41
88
1
139
28
15
20
34
1.94
3692--4055
163
2.2
163
85
4
493
32
12
21
33
1.91
3902--4132
121
1.9
122
86
0
329
34
12
20
32
1.90
4163--4234
29
2.4
31
88
4
103
27
26
12
33
1.92
4629--4670
21
2.0
20
86
4
57
28
14
19
38
1.90
4987--5050
27
2.4
27
94
0
110
48
3
15
32
1.61
4943--5124
101
1.8
101
91
0
301
48
4
12
34
1.61
5660--5720
25
2.4
26
75
10
63
24
8
6
60
1.49
7826--7860
17
2.1
17
100
0
70
31
34
0
34
1.58
11100--11145
2
24.0
2
86
8
60
54
0
2
43
1.12
12718--12784
31
2.1
31
83
8
82
35
29
20
13
1.91
13465--13765
132
2.3
133
94
2
543
50
1
8
39
1.45
15360--15411
27
1.9
27
84
7
70
28
19
23
28
1.98
17076--17170
38
2.5
38
96
0
172
43
13
10
32
1.78
17267--17299
8
4.1
8
85
14
50
36
0
12
51
1.39

Tables:   1

The End!