Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011923.1 Corchorus olitorius cultivar O-4 contig11956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3218

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--159
73
2.0
73
87
7
210
13
21
18
46
1.83
665--809
72
2.0
72
90
0
227
13
22
18
46
1.83
376--1458
360
3.0
361
94
0
1927
23
21
20
35
1.96
1025--1169
72
2.0
72
94
0
254
13
22
17
46
1.83
1097--2297
289
4.1
289
95
0
2179
24
20
21
33
1.97
1097--2297
580
2.1
579
96
0
2208
24
20
21
33
1.97
2099--2495
199
2.0
198
95
0
713
25
22
26
25
2.00
1811--2784
488
2.0
487
93
0
1664
25
21
22
30
1.99
2298--3105
289
2.8
289
94
1
1424
24
21
21
32
1.98
1520--3073
777
2.0
777
95
1
2792
25
21
21
31
1.98

Tables:   1

The End!