Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011930.1 Corchorus olitorius cultivar O-4 contig11963, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3803

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1304
154
8.4
154
89
1
1970
21
19
19
40
1.92
1--3799
462
8.0
462
75
13
3212
21
19
19
40
1.92
1224--1387
83
2.0
83
95
0
292
17
24
18
39
1.92
1068--1541
237
2.0
237
93
1
817
20
20
18
40
1.92
1305--3787
154
16.1
154
92
0
4061
21
19
18
40
1.92

Tables:   1

The End!