Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011940.1 Corchorus olitorius cultivar O-4 contig11973, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30342

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2624--2660
17
2.2
17
90
4
58
56
27
5
10
1.55
4120--4202
42
2.0
42
97
0
157
33
6
20
39
1.77
4971--5010
16
2.5
17
80
19
50
35
35
20
10
1.86
7404--7474
30
2.4
30
88
4
99
47
25
14
12
1.79
11757--11818
23
2.6
24
82
7
65
14
9
22
53
1.70
12405--12544
40
3.7
36
83
9
147
30
20
15
33
1.94
16183--16234
14
3.7
14
76
19
63
50
1
5
42
1.37
16183--16216
17
2.0
17
94
0
59
52
2
5
38
1.41
16182--16236
28
2.0
28
96
0
101
49
1
7
41
1.41
27039--27114
40
1.9
40
94
2
136
42
3
19
34
1.70
27527--28810
653
2.0
652
96
0
2379
30
16
14
38
1.89

Tables:   1

The End!