Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011942.1 Corchorus olitorius cultivar O-4 contig11975, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24778

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3983--4258
90
3.1
89
83
4
347
38
14
26
20
1.91
9301--9379
41
1.9
41
97
0
149
27
18
0
53
1.45
9328--10029
101
6.8
98
88
7
825
29
20
0
50
1.53
9200--10020
179
4.7
172
82
9
831
29
19
1
49
1.56
9461--9558
41
2.3
42
91
7
153
27
20
1
51
1.54
9183--9950
202
3.7
202
84
9
897
29
19
0
49
1.55
13977--14012
19
1.9
18
88
5
54
33
22
2
41
1.68
14731--14768
15
2.5
15
86
0
58
15
7
7
68
1.37
18724--18823
33
3.0
33
94
0
164
15
36
40
9
1.78
22628--22662
13
2.7
13
95
0
61
51
0
0
48
1.00
22628--22662
15
2.3
15
95
0
61
51
0
0
48
1.00
22628--22662
2
18.5
2
88
11
56
51
0
0
48
1.00
24443--24477
11
3.2
11
83
0
52
77
17
5
0
0.96
24448--24506
16
3.7
16
72
17
50
69
18
10
1
1.25

Tables:   1

The End!