Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011946.1 Corchorus olitorius cultivar O-4 contig11979, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11722

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1671--1935
30
9.1
30
83
10
318
47
18
13
20
1.82
1705--1752
22
2.2
22
92
7
80
41
18
16
22
1.90
2147--2505
35
10.3
36
80
7
321
42
19
18
20
1.90
2147--2416
73
3.8
72
84
3
312
42
18
18
20
1.90
2392--2447
28
2.0
28
96
0
103
48
16
10
25
1.78
2322--2499
98
1.8
98
82
2
232
41
20
17
20
1.90
4231--4255
6
4.2
6
100
0
50
0
16
0
84
0.63
6023--6058
18
1.9
18
88
5
54
36
22
2
38
1.69

Tables:   1

The End!