Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011952.1 Corchorus olitorius cultivar O-4 contig11985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24234

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1440--1487
22
2.2
22
85
7
62
41
6
16
35
1.74
6802--6847
21
2.2
21
84
7
58
67
2
19
10
1.31
8240--8752
54
9.6
54
90
1
784
23
16
22
38
1.93
8223--8752
160
3.3
160
89
3
789
23
16
22
37
1.93
8240--8778
214
2.5
215
89
2
809
23
17
21
37
1.94
8796--9089
53
5.5
53
84
6
353
29
17
20
32
1.95
8796--9093
160
1.9
160
89
2
465
30
17
19
31
1.95
8811--9089
107
2.6
106
84
4
355
29
18
20
31
1.96
10548--10681
70
1.9
70
89
3
207
38
12
10
38
1.78
13025--13064
13
3.3
13
80
16
50
15
5
17
62
1.49
22408--22482
35
2.1
37
85
9
102
18
12
6
62
1.50

Tables:   1

The End!