Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011954.1 Corchorus olitorius cultivar O-4 contig11987, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33444

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8373--8446
36
2.1
36
100
0
148
22
18
10
47
1.80
10413--10464
25
2.1
25
82
7
61
42
0
0
57
0.98
10381--10464
22
3.8
22
73
12
66
39
2
1
57
1.20
12448--12481
18
1.9
18
88
5
52
38
0
8
52
1.33
13520--13559
21
2.1
19
86
13
55
20
27
15
37
1.92
16166--16256
42
2.2
42
90
5
141
39
20
4
35
1.73
17188--17224
2
18.0
2
94
5
65
48
0
2
48
1.15
18566--18706
61
2.3
60
86
1
201
38
17
17
26
1.92
25112--25141
15
2.0
15
100
0
60
53
0
26
20
1.46
26035--26167
66
2.0
66
98
0
257
27
6
23
42
1.77
26713--26754
19
2.2
19
95
0
75
19
14
11
54
1.70

Tables:   1

The End!