Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011955.1 Corchorus olitorius cultivar O-4 contig11988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37652

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1958--1988
2
16.0
2
93
6
55
48
0
0
51
1.00
4169--4230
30
2.1
30
84
6
81
27
8
4
59
1.46
4555--4602
21
2.3
21
85
0
60
39
12
20
27
1.89
4996--5056
22
2.8
21
82
9
68
81
3
11
3
0.92
8359--8383
2
12.5
2
100
0
50
52
0
0
48
1.00
13530--13611
22
3.8
22
77
7
78
42
8
13
35
1.75
16439--16511
31
2.4
31
93
4
123
36
34
19
9
1.84
36523--36573
25
2.0
25
92
0
84
15
23
13
47
1.82

Tables:   1

The End!