Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011956.1 Corchorus olitorius cultivar O-4 contig11989, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47993

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7412--7479
34
2.0
34
100
0
136
26
20
14
38
1.91
7801--7915
56
2.1
56
98
0
221
41
13
17
26
1.87
7991--8067
38
2.0
38
97
0
145
44
10
3
41
1.57
8051--8088
11
3.5
11
89
10
51
39
0
2
57
1.12
19338--19383
6
7.5
6
81
13
58
32
13
0
54
1.39
19730--19760
16
1.9
16
100
0
62
35
0
38
25
1.56
19886--20044
77
2.1
77
87
2
230
34
11
1
52
1.45
20102--20158
25
2.2
25
81
9
62
36
12
3
47
1.58
21092--21128
17
2.1
18
85
14
51
56
0
0
43
0.99
28954--29056
43
2.4
44
85
1
127
35
9
13
40
1.78
28917--29056
22
6.6
21
72
8
106
37
9
13
39
1.77
28917--29052
65
2.1
64
78
8
143
37
8
13
39
1.77
38570--38629
18
3.3
18
97
0
111
38
28
23
10
1.87
47964--47991
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!