Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011959.1 Corchorus olitorius cultivar O-4 contig11992, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29036

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6616--6655
15
2.6
16
88
4
55
62
12
10
15
1.54
7439--7465
10
2.7
10
100
0
54
29
0
37
33
1.58
12402--12441
17
2.3
18
86
4
55
55
20
0
25
1.44
12434--12567
49
2.8
49
82
7
141
33
12
17
35
1.88
12520--12758
37
6.4
37
87
2
325
33
15
15
35
1.89
14450--14616
69
2.4
69
84
0
217
29
16
26
27
1.97
16742--16888
75
2.0
75
93
0
249
30
19
10
40
1.84
21704--21866
40
4.0
40
87
2
218
38
14
13
33
1.86
21704--21870
41
4.1
41
88
2
237
38
14
13
32
1.85
21705--21870
81
2.0
82
88
3
246
38
14
13
33
1.86
27518--27566
19
2.5
20
78
12
57
28
22
18
30
1.97
28855--28896
14
3.0
14
73
13
50
30
11
14
42
1.81

Tables:   1

The End!