Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011974.1 Corchorus olitorius cultivar O-4 contig12007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48980

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6153--6185
16
2.0
17
88
5
50
48
0
0
51
1.00
13042--13102
21
3.0
20
81
6
79
36
9
19
34
1.85
13150--13186
19
1.9
19
100
0
74
32
13
37
16
1.87
15144--15302
79
2.0
79
97
0
300
42
15
14
27
1.86
16764--17021
105
2.5
107
90
3
393
43
9
8
39
1.67
17749--17810
30
2.1
30
93
6
108
46
4
22
25
1.71
18565--18600
17
2.1
17
94
0
63
63
8
8
19
1.47
22472--22521
2
25.0
2
95
0
91
0
0
48
52
1.00
26589--26633
22
2.0
22
100
0
90
44
17
13
24
1.85
29949--30024
29
2.5
30
83
12
102
30
27
9
32
1.88
45494--45605
56
2.0
57
87
1
163
43
17
9
28
1.81

Tables:   1

The End!