Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011977.1 Corchorus olitorius cultivar O-4 contig12010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19263

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6790--6826
15
2.5
15
90
0
56
40
8
13
37
1.74
9158--9475
67
4.6
67
90
3
456
37
11
21
29
1.89
9491--9569
39
2.0
39
90
4
124
26
17
20
35
1.95
9549--10018
65
7.3
65
84
4
578
32
14
23
28
1.95
9542--10081
126
4.2
127
83
5
570
32
15
23
27
1.95
9529--10081
65
8.6
65
82
5
563
32
15
23
28
1.95
10259--10307
25
1.9
26
87
4
73
40
8
24
26
1.83
10285--10433
50
3.0
50
91
1
237
36
11
26
25
1.90
17737--17798
27
2.3
27
82
0
70
14
20
29
35
1.93
19111--19172
22
3.0
22
79
6
58
66
3
29
1
1.17

Tables:   1

The End!