Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011978.1 Corchorus olitorius cultivar O-4 contig12011, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3302

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
631--677
5
8.6
5
86
13
58
63
19
0
17
1.30
630--678
11
4.4
11
82
17
57
65
18
0
16
1.28
619--683
28
2.3
27
76
10
67
67
13
6
12
1.40
1265--1410
50
3.0
48
87
6
211
30
19
15
34
1.93
1853--2019
79
2.1
79
92
0
271
29
16
14
40
1.87
2102--2334
50
4.7
50
91
2
364
30
29
12
27
1.93
2346--2626
50
5.6
50
91
2
449
35
12
25
25
1.91
2882--2943
27
2.3
27
88
0
88
14
20
29
35
1.93

Tables:   1

The End!