Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011981.1 Corchorus olitorius cultivar O-4 contig12014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31811

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6032--6101
36
1.9
36
88
0
104
22
10
8
58
1.57
6608--7005
202
2.0
202
95
2
719
43
8
11
36
1.72
7112--7192
39
2.0
40
92
2
137
37
3
8
50
1.51
13428--13529
31
3.4
31
75
8
111
31
21
11
35
1.90
15127--15227
31
3.3
30
77
10
116
34
9
21
33
1.87
19872--19924
25
2.1
25
85
0
70
41
5
13
39
1.68
27217--27251
18
1.9
18
94
0
61
14
25
22
37
1.92
27738--27852
59
1.9
59
98
0
221
13
26
34
26
1.92
27738--27867
59
2.2
59
93
2
208
13
26
34
24
1.93
30261--30300
15
2.6
16
92
4
64
65
12
10
12
1.49
31659--31717
29
2.0
30
86
6
84
35
18
10
35
1.85
31685--31718
12
2.9
12
91
4
52
38
17
11
32
1.86

Tables:   1

The End!