Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011983.1 Corchorus olitorius cultivar O-4 contig12016, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27514

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4285--4386
46
2.3
46
85
10
131
20
19
4
54
1.62
4363--4464
22
4.7
22
83
1
134
10
23
6
58
1.55
4474--5299
47
17.4
47
79
9
793
24
20
6
48
1.72
4474--4745
148
1.8
148
89
0
427
23
20
7
47
1.75
4559--4921
176
2.0
181
91
3
601
25
20
6
47
1.73
4742--5299
148
3.9
144
85
6
702
24
20
5
49
1.70
4498--5333
195
4.4
190
79
10
741
23
20
6
49
1.71
11633--12254
338
1.8
339
82
9
795
31
14
19
34
1.92
18336--18365
15
2.1
14
93
6
51
70
6
13
10
1.34
26807--26882
16
4.8
16
82
6
100
40
38
13
7
1.73

Tables:   1

The End!