Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011990.1 Corchorus olitorius cultivar O-4 contig12023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15842

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3798--3823
11
2.4
11
100
0
52
69
7
15
7
1.35
4501--4587
44
2.0
44
84
4
115
41
20
3
34
1.69
8450--8483
15
2.3
15
89
0
50
8
2
14
73
1.19
8450--8491
22
1.9
22
85
9
59
9
4
14
71
1.28
12009--12034
11
2.4
11
100
0
52
69
7
15
7
1.35
12597--12671
29
2.6
29
83
10
84
33
21
6
38
1.79
12639--12672
12
2.9
12
91
4
52
38
17
11
32
1.86
14209--14251
16
2.8
15
82
10
52
55
20
9
13
1.66

Tables:   1

The End!