Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011991.1 Corchorus olitorius cultivar O-4 contig12024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18877

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--667
18
1.9
18
94
0
61
51
11
8
28
1.67
787--818
16
2.0
16
93
0
55
46
0
0
53
1.00
761--810
25
1.9
27
88
8
77
42
0
4
54
1.19
782--834
19
2.8
19
82
8
63
49
0
0
50
1.00
837--911
35
2.1
35
97
0
141
41
18
17
22
1.90
9744--10033
89
3.3
89
93
0
492
24
25
17
32
1.97
10176--10252
40
1.9
40
89
0
118
49
18
1
31
1.56
10453--10494
22
1.9
22
85
0
57
73
2
16
7
1.15
13442--13557
62
1.9
61
94
1
205
33
24
2
39
1.69
14171--14221
16
3.2
16
94
0
93
31
5
58
3
1.40
14521--14770
125
2.0
125
96
0
455
32
20
17
29
1.96
16222--16247
4
6.5
4
100
0
52
46
0
0
53
1.00
17359--17426
13
5.2
13
82
7
50
61
27
1
8
1.34
17359--17426
6
10.5
6
75
12
55
61
27
1
8
1.34
17365--17425
32
1.9
32
89
0
95
62
27
0
9
1.27

Tables:   1

The End!