Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011995.1 Corchorus olitorius cultivar O-4 contig12028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20569

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5652--5692
19
2.1
20
86
4
57
46
9
31
12
1.74
9736--9761
13
2.0
13
100
0
52
38
15
30
15
1.88
9994--10045
21
2.5
21
70
0
50
38
11
23
26
1.89
13638--13679
21
2.0
21
100
0
84
19
19
28
33
1.96
14822--14851
14
2.1
14
100
0
60
63
6
0
30
1.20
14825--14878
15
3.7
15
82
7
58
66
3
1
27
1.19

Tables:   1

The End!