Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011998.1 Corchorus olitorius cultivar O-4 contig12031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18889

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5045--5115
21
3.4
21
90
3
108
28
15
26
29
1.96
15365--15400
10
3.5
10
85
7
54
75
0
19
5
1.00
18294--18347
20
2.7
20
80
11
58
50
3
5
40
1.44
18673--18798
21
6.0
21
80
8
123
30
11
21
37
1.88
18673--18760
41
2.1
42
83
10
110
27
10
21
40
1.85

Tables:   1

The End!