Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012002.1 Corchorus olitorius cultivar O-4 contig12035, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11533

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5848--5894
16
2.9
16
81
15
53
63
0
31
4
1.13
7896--8021
28
4.4
28
88
2
180
44
24
15
15
1.85
7896--8021
57
2.2
57
91
2
200
44
24
15
15
1.85
8235--8753
50
10.5
50
90
3
829
23
29
11
35
1.91
9369--9411
2
21.5
2
95
0
77
48
0
2
48
1.14

Tables:   1

The End!